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Author summary This paper introduces PhysiCell: an open source, agent-based modeling framework for 3-D multicellular simulations. It includes a standard library of sub-models for cell fluid and solid volume changes, cycle progression…

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Note: on Windows you will need Tcl/Tk 8.6.6 or newer to use the regular version of ProB (we currently also provide a version compiled for Tcl/Tk 8.5.x using an older SICStus Prolog version).

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